Publikationen der Abteilung Computational Biology

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Gotsmann VL, Ting MKY, Haase N, Rudorf S, Zoschke R, Willmund F. Utilizing high-resolution ribosome profiling for the global investigation of gene expression in Chlamydomonas. Plant Journal. 2024 Feb 26;117(5):1614-1634. doi: 10.1111/tpj.16577


Christ S, Schwabeneder D, Rackauckas C, Borregaard M, Breloff T. Plots.jl – A User Extendable Plotting API for the Julia Programming Language. Journal of open research software. 2023 Feb 14;11(1):5. doi: 10.5334/jors.431
Förste S, Vonshak O, Daube SS, Bar-Ziv RH, Lipowsky R, Rudorf S. Computational analysis of protein synthesis, diffusion, and binding in compartmental biochips. Microbial cell factories. 2023 Dez;22(1):244. Epub 2023 Nov 30. doi: 10.1186/s12934-023-02237-5
Goth F, Alves R, Braun M, Castro LJ, Chourdakis G, Christ S et al. Foundational Competencies and Responsibilities of a Research Software Engineer. 2023 Nov 19. Epub 2023 Nov 19. doi: 10.48550/arXiv.2311.11457
Lankeit J, Förste S, Rudorf S. Dominance analysis of competing protein assembly pathways. PLOS ONE. 2023 Feb 24;18(2):e0281964. doi: 10.1371/journal.pone.0281964


Christ S. Creating a reproducible report using julia and pythontex. 2022.


Rudorf S, Thommen M, Rodnina MV, Lipowsky R. Protein Synthesis by Ribosomes: Mapping In Vitro onto In Vivo Rates. Biophysical journal. 2014 Jan. doi: 10.1016/j.bpj.2013.11.1407


Deneke C, Rudorf S, Valleriani A. Transient Phenomena in Gene Expression after Induction of Transcription. PLOS ONE. 2012 Apr. doi: 10.1371/journal.pone.0035044
Rudorf S, Rädler JO. Self-Assembly of Stable Monomolecular Nucleic Acid Lipid Particles with a Size of 30 nm. Journal of the American Chemical Society. 2012 Jul 3. doi: 10.1021/ja302930b