List of Publications Prof. Dr. Sophia Rudorf
Showing results 1 - 10 out of 18
2025
Müller, JA, Schwake, G, Reiser, A, Woschée, D, Alirezaeizanjani, Z, Rädler, JO & Rudorf, S 2025, 'Less is more: slow-codon windows enhance eGFP mRNA resilience against RNA interference', Journal of the Royal Society Interface, vol. 22, no. 224, 20240582. https://doi.org/10.1098/rsif.2024.0582
Zabic, M, Reifenrath, M, Wegner, C, Bethge, H, Landes, T, Rudorf, S & Heinemann, D 2025, 'Point spread function estimation with computed wavefronts for deconvolution of hyperspectral imaging data', Scientific reports, vol. 15, no. 1, 673. https://doi.org/10.1038/s41598-024-84790-6
2024
Gotsmann, VL, Ting, MKY, Haase, N, Rudorf, S, Zoschke, R & Willmund, F 2024, 'Utilizing high-resolution ribosome profiling for the global investigation of gene expression in Chlamydomonas', Plant Journal, vol. 117, no. 5, pp. 1614-1634. https://doi.org/10.1111/tpj.16577
Haase, N, Holtkamp, W, Christ, S, Heinemann, D, Rodnina, MV & Rudorf, S 2024, 'Decomposing bulk signals to reveal hidden information in processive enzyme reactions: A case study in mRNA translation', PLoS Computational Biology, vol. 20, no. 3, 1011918. https://doi.org/10.1101/2023.05.17.541147, https://doi.org/10.1371/journal.pcbi.1011918
Stemwedel, K, Haase, N, Christ, S, Bogdanova, NV & Rudorf, S 2024, 'Synonymous rpsH variants: the common denominator in Escherichia coli adapting to ionizing radiation', NAR Genomics and Bioinformatics, vol. 6, no. 3, lqae110. https://doi.org/10.1093/nargab/lqae110
2023
Förste, S, Vonshak, O, Daube, SS, Bar-Ziv, RH, Lipowsky, R & Rudorf, S 2023, 'Computational analysis of protein synthesis, diffusion, and binding in compartmental biochips', Microbial cell factories, vol. 22, no. 1, 244. https://doi.org/10.1186/s12934-023-02237-5
Lankeit, J, Förste, S & Rudorf, S 2023, 'Dominance analysis of competing protein assembly pathways', PLOS ONE, vol. 18, no. 2, e0281964. https://doi.org/10.1371/journal.pone.0281964
2022
Alirezaeizanjani, Z, Trösemeier, JH, Kamp, C & Rudorf, S 2022, Tailoring Codon Usage to the Underlying Biology for Protein Expression Optimization. in E Garcia Fruitos & A Aris Giralt (eds), Insoluble Proteins: Methods and Protocols. Methods in Molecular Biology, vol. 2406, Humana Press Inc., New York, pp. 85-92. https://doi.org/10.1007/978-1-0716-1859-2_4
2020
Trösemeier, JH, Rudorf, S, Lößner, H, Hofner, B & Kamp, C 2020, 'Modellentwicklung und maschinelles Lernen erhöhen die Proteinausbeute', BioSpektrum, vol. 26, no. 3, pp. 262-264. https://doi.org/10.1007/s12268-020-1369-3
Vonshak, O, Divon, Y, Förste, S, Garenne, D, Noireaux, V, Lipowsky, R, Rudorf, S, Daube, SS & Bar-Ziv, RH 2020, 'Programming multi-protein assembly by gene-brush patterns and two-dimensional compartment geometry', Nature nanotechnology, vol. 15, no. 9, pp. 783-791. https://doi.org/10.1038/s41565-020-0720-7
